#Sample input file of 41 primers with both positive and negative representations# >ssrVrZAG112 -1,2,10,14,18,26,28,35,37,38,40 >ssrVrZAG1 2,2,3,4,5,8,9,11,12,15,16,17,19,20,23,24,25,26,27,28,30,31,33,34,35,36,37,38,39,41 >ssrVrZAG14 3,1,2,3,6,8,10,11,12,13,14,16,19,20,21,22,23,25,26,27,30,31,34,35,36,37,38,39,41 >ssrVrZAG15 4,1,2,4,5,6,9,10,11,12,13,14,15,16,18,19,20,21,22,23,25,26,27,28,30,31,32,38,40,41 >ssrVrZAG21 5,1,2,4,5,6,7,8,9,10,12,13,14,15,17,18,19,20,21,23,24,25,29,30,31,32,33,34,35,36,37,38,39,41 >ssrVrZAG26 6,1,3,4,5,6,7,8,9,10,11,14,15,16,17,18,19,21,23,24,25,26,27,28,29,31,32,33,35,36,37,38,39,40,41 >ssrVrZAG30 -7,2,3,4,12,21,22,23,24,28,29,30,31,32 >ssrVrZAG47 8,1,2,3,5,6,7,8,9,10,12,13,16,17,18,21,23,24,25,26,27,28,29,31,32,33,34,36,38,39,40,41 >ssrVrZAG64 9,1,2,4,5,6,7,8,9,10,11,12,15,16,18,19,20,21,22,23,24,26,27,28,29,30,31,32,33,34,35,36,37,38,41 >ssrVrZAG67 10,3,4,5,6,7,8,9,10,11,12,13,16,17,19,20,21,22,25,26,27,28,29,30,31,32,33,34,37,38,39,40,41 >ssrVrZAG82 11,1,2,3,4,6,7,9,10,11,13,14,15,16,17,18,19,21,22,23,24,25,26,27,28,29,30,32,33,34,35,36,37,38,41 >ssrVrZAG83 12,1,2,3,4,5,8,9,10,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,38,39,40,41 >ssrVrZAG93 13,1,3,4,5,7,8,10,11,12,13,15,16,17,18,19,21,22,24,25,26,27,28,30,31,32,34,36,37,38,40,41 >VMC8D3 14,3,4,5,6,7,11,12,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,30,31,32,33,34,35,36,37,38,39,40,41 >VMC8E6 15,1,2,4,5,6,7,9,11,12,13,14,15,16,17,18,20,21,22,24,25,26,27,31,32,34,36,39,40,41 >VMC8F4.2 16,1,2,3,4,6,7,8,9,10,11,12,13,14,15,16,17,19,20,21,22,23,25,26,27,28,29,30,31,32,34,37,39,40 >VMC8G3.2 17,1,2,5,6,7,8,10,11,12,13,14,15,16,17,18,21,22,23,24,25,26,27,28,29,30,31,32,34,35,36,37,38,39,40,41 >VMC9b5 18,4,5,6,7,8,9,11,12,13,14,15,17,18,19,20,21,22,23,24,27,28,29,30,31,32,34,36,38,39,40 >VMC9c5 19,1,2,3,4,5,6,7,9,10,11,12,13,14,16,18,19,20,21,22,23,24,25,26,27,28,29,33,35,36,37,38,39,40,41 >VMC9d3 20,1,2,3,4,5,7,9,10,12,14,15,16,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,35,36,37,38,39,40 >VMC9f2 21,1,3,4,5,6,8,9,10,11,12,13,14,15,16,17,18,19,20,21,23,25,26,28,29,30,31,32,34,35,37,39 >VMC9f4 22,1,3,4,9,10,11,12,13,14,15,16,17,18,19,20,22,23,24,25,26,28,29,30,32,33,34,35,36,37,38,39,40,41 >VMC9g4 23,1,2,3,4,5,6,8,9,11,12,14,16,17,18,19,20,21,22,23,24,25,26,27,28,29,31,32,33,34,35,37,39,40 >VMC9h4_2 24,1,2,5,6,8,9,11,12,13,14,15,17,18,19,20,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,39 >VVMD14 25,1,2,3,5,6,7,8,10,11,12,13,14,15,16,17,19,20,21,22,23,24,25,26,27,29,30,32,34,35,36,37,38,39,40,41 >VVMD17 26,2,3,4,6,7,8,9,10,11,12,13,14,15,16,17,19,20,21,22,23,24,25,26,29,30,31,33,34,35,36,38,39,40,41 >VVMD21 27,1,2,3,4,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,23,24,25,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41 >VVMD24 -28,1,3,5,7,15,25,26,35,36,38 >VVMD25 29,1,5,6,8,9,10,11,12,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,32,33,34,35,36,37,39,40,41 >VVMD27 30,1,2,3,4,5,9,10,11,12,13,14,16,17,18,20,21,22,24,25,26,27,28,29,30,31,32,33,35,36,37,38,39,40,41 >VVMD31 31,1,2,3,4,5,6,8,9,10,12,13,14,15,16,17,18,20,21,23,24,26,27,28,30,31,32,34,36,38,39,40 >VVMD32 32,1,4,5,6,8,9,10,11,12,13,14,15,16,17,18,20,21,22,23,24,25,27,28,29,30,31,32,33,36,37,38,40,41 >VVMD34 33,1,2,5,6,7,8,9,10,11,12,14,19,20,22,23,24,26,27,28,29,30,32,33,34,35,36,37,38,41 >VVMD36 34,1,2,3,5,7,8,9,10,11,12,13,14,15,16,17,18,21,22,23,24,25,26,27,28,29,31,33,34,36,37,38,39,40,41 >VVMD6 -35,1,4,8,10,13,15,16,18,28,31,32,34 >VVMD7 -36,4,10,16,21,23,28,40 >VVS1 -37,1,4,8,12,15,18,26,31 >VS2 -38,1,15,16,21,23,24,28,29 >VMC4D2F -39,4,9,11,13,32,33 >VMC4F3F -40,1,3,5,9,11,21,24,33,36 >VMC4C6F -41,16,18,20,21,23,24,31